Bacillus halodurans RNase H catalytic domain mutant D132N in complex with 12-mer RNA/DNA hybrid DOI:10.2210/pdb1zbi/pdb   NDB ID: PH0016

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase/rna/dna Structure Weight: 40231.20 Molecule: 5'-R(*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*C)-3' Polymer: 1 Type: rna Length: 12 Chains: C Molecule: 5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3' Polymer: 2 Type: dna Length: 12 Chains: D Molecule: ribonuclease H-related protein Polymer: 3 Type: protein Length: 142 Chains: A, B EC#: 3.1.26.4    Fragment: catalytic domain (residues 59-196) Mutation: D132N Organism Bacillus halodurans C-125 Gene Names rnhA BH0863 UniProtKB:   Protein Feature View | Search PDB | Q9KEI9         Source Hide Polymer: 1 Scientific Name: Synthetic construct   Taxonomy     Polymer: 2 Scientific Name: Synthetic construct   Taxonomy     Polymer: 3 Scientific Name: Bacillus halodurans   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1ZBF  Crystal strcture of B. halodurans RNase H catalytic domain mutant D132N  1ZBL        Ligand Chemical Component Hide Identifier Formula Name Interactions MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 2 Domains - data from SCOP   Pfam Classification: 1 Domain - data from Pfam       Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: PH0016     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Nowotny, M.,  Gaidamakov, S.A.,  Crouch, R.J.,  Yang, W. Deposition:   2005-04-08 Release:   2005-07-12 Last Modified (REVDAT):   2011-07-13     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance 2011-07-13 Source and taxonomy     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.85 R-Value: 0.206 (obs.) R-Free: 0.248 Space Group: C 2 Unit Cell:   Length [Å] Angles [°] a = 136.39 α = 90.00  b = 36.96 β = 121.51  c = 93.20 γ = 90.00