1Z0N

the glycogen-binding domain of the AMP-activated protein kinase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.49 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.184

Literature

Macromolecules
Sequence Display for 1Z0N

Classification: SUGAR BINDING PROTEIN

Total Structure Weight: 36324.09

Macromolecule Entities
Molecule Chains Length Organism Details
5'-AMP-activated protein kinase, beta-1 subunit A, B, C 96 Rattus norvegicus Fragment: 68-163 fragment
Mutation: L105M
Gene Name(s): Prkab1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BCD
Query on BCD

A, B, C BETA-CYCLODEXTRIN
CYCLO-HEPTA-AMYLOSE (Synonym)
C42 H70 O35
WHGYBXFWUBPSRW-FOUAGVGXSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.49 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.184
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 43.75 α = 71.90
b = 45.25 β = 69.70
c = 50.60 γ = 65.40

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-03-02
  • Released Date: 2005-10-25
  • Deposition author(s): Polekhina, G., Gupta, A., van Denderen, B.J., Feil, S.C., Kemp, B.E., Stapleton, D., Parker, M.W.

Revision History

  • 2008-04-30
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance