Structure of the extracellular domain of the epidermal growth factor receptor in complex with the Fab fragment of cetuximab/Erbitux/IMC-C225 DOI:10.2210/pdb1yy9/pdb

1YY9   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Immune System/transferase Structure Weight: 120236.76 Molecule: Epidermal Growth Factor Receptor Polymer: 1 Type: protein Length: 624 Chains: A EC#: 2.7.10.1    Fragment: UNP residues 25-642 Organism Homo sapiens Gene Names EGFR ERBB ERBB1 HER1 UniProtKB:   Protein Feature View | Search PDB | P00533     Molecule: Cetuximab Fab Light chain Polymer: 2 Type: protein Length: 213 Chains: C Organism Homo sapiens Mus musculus Molecule: Cetuximab Fab Heavy chain Polymer: 3 Type: protein Length: 221 Chains: D Organism Homo sapiens Mus musculus     Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda   Polymer: 2 Scientific Name: Mus musculus, homo sapiens   Taxonomy   Common Name: House mouse, human Expression System: Mus musculus   Polymer: 3 Scientific Name: Mus musculus, homo sapiens   Taxonomy   Common Name: House mouse, human Expression System: Mus musculus   Polymer: 5 Scientific Name: Synthetic construct   Taxonomy     Polymer: 6 Scientific Name: Synthetic construct   Taxonomy         Related PDB Entries Hide Identifier Details 1YY8  Fab fragment from the monoclonal antibody cetuximab      Ligand Chemical Component Hide Identifier Formula Name Interactions BMA Search  Download  C6 H12 O6 BETA-D-MANNOSE   Ligand Explorer MAN Search  Download  C6 H12 O6 ALPHA-D-MANNOSE   Ligand Explorer NAG Search  Download  C8 H15 N O6 N-ACETYL-D-GLUCOSAMINE   Ligand Explorer NDG Search  Download  C8 H15 N O6 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 4 Domains - data from SCOP   CATH Classification v3.4.0: 8 Domains - data from CATH   Pfam Classification: 13 Domains - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Li, S.,  Schmitz, K.R.,  Jeffrey, P.D.,  Wiltzius, J.J.W.,  Kussie, P.,  Ferguson, K.M. Deposition:   2005-02-24 Release:   2005-04-26 Last Modified (REVDAT):   2011-07-13     Revision History    Hide Mouse over text for details 2011-07-13 Non-polymer description 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors Resolution[Å]:   2.61 R-Value: 0.242 (obs.) R-Free: 0.289 Space Group: P 21 Unit Cell:   Length [Å] Angles [°] a = 77.82 α = 90.00  b = 70.86 β = 102.48  c = 147.12 γ = 90.00      Molecule of the Month Hide Epidermal Growth Factor Nanobodies Antibodies Hemagglutinin