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Protocatechuate 3,4-Dioxygenase Y408E mutant
1YKM
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Oxidoreductase
    Structure Weight: 294440.08
    Molecule: Protocatechuate 3,4-dioxygenase alpha chain
    Polymer: 1 Type: protein Length: 200
    Chains: A, C, E, G, I, K
    EC#: 1.13.11.3   
    Organism Pseudomonas putida
    Gene Name pcaG
    UniProtKB:   Protein Feature View | Search PDB | P00436  
    Molecule: Protocatechuate 3,4-dioxygenase beta chain
    Polymer: 2 Type: protein Length: 238
    Chains: B, D, F, H, J, L
    EC#: 1.13.11.3   
    Mutation: Y408E
    Organism Pseudomonas putida
    Gene Name pcaH
    UniProtKB:   Protein Feature View | Search PDB | P00437  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Pseudomonas putida   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Pseudomonas putida   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1ykk   
    1ykn   
    1yko   
    1ykp   
    2pcd   
    3pca   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    FE
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    FE Fe
    FE (III) ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    CME
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    CME C5 H11 N O3 S2 CYS lPeptideLinking
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA,PQS (software)
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  •   Deposition Summary Hide
    Authors:   Brown, C.K.,  Ohlendorf, D.H.

    Deposition:   2005-01-18
    Release:   2005-08-16
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
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    2011-07-13
    Biological assembly
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.22
    R-Value: 0.169 (obs.)
    R-Free: 0.199
    Space Group: I 1 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 196.61 α = 90.00 
    b = 127.73 β = 97.66 
    c = 134.32 γ = 90.00