1W1H

CRYSTAL STRUCTURE OF THE PDK1 PLECKSTRIN HOMOLOGY (PH) DOMAIN

Structural Biology Knowledgebase: 1W1H SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.156

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1W1H

Classification: TRANSFERASE

Total Structure Weight: 72594.56

Macromolecule Entities
Molecule Chains Length Organism Details
3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1 A, B, C, D 151 Homo sapiens EC#: 2.7.11.1 IUBMB
Fragment: PLECKSTRIN HOMOLOGY DOMAIN, RESIDUES 409-556
Gene Name(s): PDPK1 Gene View PDK1 Gene View

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B, C GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.156
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 42.69 α = 90.00
b = 65.28 β = 97.49
c = 101.12 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-06-21
  • Released Date: 2004-11-19
  • Deposition author(s): Komander, D., Deak, M., Alessi, D.R., Van Aalten, D.M.F.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4