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Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y. This file contains the 30s subunit of one 70s ribosome. The entire crystal structure contains five 70s ribosomes and is described in remark 400.
DOI:10.2210/pdb1voq/pdb   NDB ID: RR0085
1VOQ
Split Entry
The asymmetric unit for this structure is composed of multiple PDB entries:
1VOQ   1VOR   1VOS   1VOU   1VOV   1VOW   1VOX   1VOY   1VOZ   1VP0  
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The complete entry has been assigned PDB ID 4V4G and is available for download in PDBx/mmCIF and PDBML/XML formats from the FTP archive at:
ftp://ftp.wwpdb.org/pub/pdb/data/large_structures/mmCIF/4v4g.cif.gz
ftp://ftp.wwpdb.org/pub/pdb/data/large_structures/XML/4v4g.xml.gz
 
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Ribosome
    Structure Weight: 776293.04
    Molecule: 16S ribosomal RNA
    Polymer: 1 Type: rna Length: 1526
    Chains: A
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S2
    Polymer: 2 Type: protein Length: 234
    Chains: B
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S3
    Polymer: 3 Type: protein Length: 206
    Chains: C
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S4
    Polymer: 4 Type: protein Length: 208
    Chains: D
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S5
    Polymer: 5 Type: protein Length: 150
    Chains: E
    Organism Escherichia coli
    Gene Names rpsE TTHA1675
    UniProtKB:   Protein Feature View | Search PDB | Q5SHQ5  
    Molecule: 30S ribosomal protein S6
    Polymer: 6 Type: protein Length: 101
    Chains: F
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S7
    Polymer: 7 Type: protein Length: 155
    Chains: G
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S8
    Polymer: 8 Type: protein Length: 138
    Chains: H
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S9
    Polymer: 9 Type: protein Length: 127
    Chains: I
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S10
    Polymer: 10 Type: protein Length: 98
    Chains: J
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S11
    Polymer: 11 Type: protein Length: 119
    Chains: K
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S12
    Polymer: 12 Type: protein Length: 124
    Chains: L
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S13
    Polymer: 13 Type: protein Length: 125
    Chains: M
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S14
    Polymer: 14 Type: protein Length: 60
    Chains: N
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S15
    Polymer: 15 Type: protein Length: 88
    Chains: O
    Organism Escherichia coli
    Gene Names rpsO rps15 TT_C0773
    UniProtKB:   Protein Feature View | Search PDB | P62657  
    Molecule: 30S ribosomal protein S16
    Polymer: 16 Type: protein Length: 83
    Chains: P
    Organism Escherichia coli
    Molecule: 30S ribosomal protein S17
    Polymer: 17 Type: protein Length: 104
    Chains: Q
    Organism Escherichia coli
    Gene Names rpsQ TTHA1683
    UniProtKB:   Protein Feature View | Search PDB | Q5SHP7  
    Molecule: 30S ribosomal protein S18
    Polymer: 18 Type: protein Length: 73
    Chains: R
    Organism Escherichia coli
    Gene Names rpsR TTHA0243
    UniProtKB:   Protein Feature View | Search PDB | Q5SLQ0  
    Molecule: 30S ribosomal protein S19
    Polymer: 19 Type: protein Length: 80
    Chains: S
    Organism Escherichia coli
    Gene Names rpsS rps19 TT_C1324
    UniProtKB:   Protein Feature View | Search PDB | P62660  
    Molecule: 30S ribosomal protein S20
    Polymer: 20 Type: protein Length: 99
    Chains: T
    Organism Escherichia coli
    Molecule: protein Y
    Polymer: 21 Type: protein Length: 90
    Chains: a
    Organism Escherichia coli
    Gene Names raiA yfiA b2597 JW2578
    UniProtKB:   Protein Feature View | Search PDB | P0AD49  
     
  •   Structure Validation Hide

    Download full validation report    

     
  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 2
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 3
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 4
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 5
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 6
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 7
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 8
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 9
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 10
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 11
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 12
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 13
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 14
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 15
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 16
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 17
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 18
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 19
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 20
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 21
    Scientific Name: Escherichia coli   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1VOR  50s subunit of 70s ribosome one 
    1VOS  30s subunit of 70s ribosome two 
    1VOU  50s subunit of 70s ribosome two 
    1VOV  30s subunit of 70s ribosome three 
    1VOW  50s subunit of 70s ribosome three 
    1VOX  30s subunit of 70s ribosome four 
    1VOY  50s subunit of 70s ribosome four 
    1VOZ  30s subunit of 70s ribosome five 
    1VP0  50s subunit of 70s ribosome five 
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: RR0085
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Composite of PDB entries (1VOQ and 1VOR)