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STRUCTURAL MECHANISM FOR THE INHIBITION OF CD5-P25 FROM THE ROSCOVITINE, ALOISINE AND INDIRUBIN.
1UNL
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Cyclin Dependent Kinase
    Structure Weight: 113455.66
    Molecule: CYCLIN-DEPENDENT KINASE 5
    Polymer: 1 Type: protein Length: 292
    Chains: A, B
    EC#: 2.7.11.22   
    Mutation: YES
    Organism: Homo sapiens
    Gene Names: Gene View for CDK5 CDKN5
    UniProtKB: Protein Feature View | Search PDB | Q00535  
    Molecule: CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1
    Polymer: 2 Type: protein Length: 208
    Chains: D, E
    Fragment: RESIDUES 100-307
    Mutation: YES
    Organism: Homo sapiens
    Gene Names: Gene View for CDK5R1 CDK5R NCK5A
    UniProtKB: Protein Feature View | Search PDB | Q15078  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Related PDB Entries Hide
    Identifier Details
    1H4L  STRUCTURE AND REGULATION OF THE CDK5-P25 (NCK5A) COMPLEX 
    1UNG  STRUCTURAL MECHANISM FOR THE INHIBITION OF CDK5-P25 BY ROSCOVITINE, ALOISINE AND INDIRUBIN. 
    1UNH  STRUCTURAL MECHANISM FOR THE INHIBITION OF CDK5-P25 BY ROSCOVITINE, ALOISINE AND INDIRUBIN. 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    RRC
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    RRC C19 H26 N6 O
    R-ROSCOVITINE
    RRC:1UNL
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    RRC
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    RRC
    IC50: 160 - 800 nM (99) - data from BindingDB  
    Kd: 1900 - 1900000 nM (99) - data from BindingDB  
    N/Ain BindingMoad
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PQS (software)
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  •   Deposition Summary Hide
    Authors:   Mapelli, M.,  Crovace, C.,  Massimiliano, L.,  Musacchio, A.

    Deposition:   2003-09-10
    Release:   2004-11-10
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
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    2011-07-13
    Flag residual B-value
    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.20
    R-Value: 0.216 (obs.)
    R-Free: 0.219
    Space Group: P 32 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 117.99 α = 90.00 
    b = 117.99 β = 90.00 
    c = 156.17 γ = 120.00