1UMK

The Structure of Human Erythrocyte NADH-cytochrome b5 Reductase

Structural Biology Knowledgebase: 1UMK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.207
  • R-Value Work: 0.165

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1UMK

Classification: OXIDOREDUCTASE

Total Structure Weight: 32084.96

Macromolecule Entities
Molecule Chains Length Organism Details
NADH-cytochrome b5 reductase A 275 Homo sapiens EC#: 1.6.2.2 IUBMB
Gene Name(s): CYB5R3 Gene View DIA1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.207
  • R-Value Work: 0.165
  • Space Group: P 41
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 65.87 α = 90.00
b = 65.87 β = 90.00
c = 76.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-10-03
  • Released Date: 2004-11-02
  • Deposition author(s): Bando, S., Takano, T., Yubisui, T., Shirabe, K., Takeshita, M., Horii, C., Nakagawa, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4