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Crystal Structure of the broadly neutralizing anti-HIV-1 antibody 2F5 in complex with a gp41 7mer epitope
1TJG
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Viral Protein/immune System
    Structure Weight: 50105.81
    Molecule: FAB 2F5 Light Chain
    Polymer: 1 Type: protein Length: 214
    Chains: L
    Organism: Homo sapiens
    Molecule: FAB 2F5 Heavy Chain
    Polymer: 2 Type: protein Length: 237
    Chains: H
    Organism: Homo sapiens
    Molecule: Envelope glycoprotein GP41
    Polymer: 3 Type: protein Length: 7
    Chains: P
    Fragment: Transmembrane Glycoprotein (residues 659-669)
    Organism: Human immunodeficiency virus 1
    Gene Name: env
    UniProtKB: Protein Feature View | Search PDB | Q75760  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

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  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Cricetulus griseus  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Cricetulus griseus  
    Polymer: 3
    Scientific Name: Synthetic construct (Human immunodeficiency virus 1)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1TJH  2F5 Fab complexed with a gp41 11mer 
    1TJI  2F5 Fab complexed with a gp41 17mer 
    2F5B  2F5 in complex with its gp41 eptiope 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    EDO
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    EDO C2 H6 O2
    1,2-ETHANEDIOL
    IPA
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    IPA C3 H8 O
    ISOPROPYL ALCOHOL
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    YCM
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    YCM C5 H10 N2 O3 S CYS lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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