1SY0

1.15 A Crystal Structure of T121V Mutant of Nitrophorin 4 from Rhodnius Prolixus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.172
  • R-Value Work: 0.141

Literature

Macromolecules
Sequence Display for 1SY0

Classification: TRANSPORT PROTEIN

Total Structure Weight: 20925.22

Macromolecule Entities
Molecule Chains Length Organism Details
Nitrophorin 4 A 184 Rhodnius prolixus EC#: 1.7.6.1 IUBMB
Mutation: T121V
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NH4
Query on NH4

A AMMONIUM ION
H4 N
QGZKDVFQNNGYKY-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.172
  • R-Value Work: 0.141
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 70.30 α = 90.00
b = 42.76 β = 93.66
c = 52.89 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-03-31
  • Released Date: 2004-06-08
  • Deposition author(s): Maes, E.M., Weichsel, A., Andersen, J.F., Shepley, D., Montfort, W.R.

Revision History

  • Version 1_0: 2004-06-08

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2011-11-16

    Type: Atomic model