1RUR

Crystal Structure (I) of native Diels-Alder antibody 13G5 Fab at pH 8.0 with a data set collected at SSRL beamline 9-1.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.191

Literature

Macromolecules
Sequence Display for 1RUR

Classification: IMMUNE SYSTEM

Total Structure Weight: 47138.07

Macromolecule Entities
Molecule Chains Length Organism Details
immunoglobulin 13G5, light chain L 217 Mus musculus Fragment: fab
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
immunoglobulin 13G5, heavy chain H 218 Mus musculus Fragment: fab
Gene Name(s): Igh
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

L ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.191
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 179.27 α = 90.00
b = 40.31 β = 109.91
c = 67.63 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-12-11
  • Released Date: 2004-03-02
  • Deposition author(s): Zhu, X., Wentworth Jr., P., Wentworth, A.D., Eschenmoser, A., Lerner, R.A., Wilson, I.A.

Revision History

  • 2008-04-29
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance