1RQE

Propionibacterium shermanii transcarboxylase 5S subunit bound to oxaloacetate

Structural Biology Knowledgebase: 1RQE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.152

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1RQE

Classification: TRANSFERASE

Total Structure Weight: 59800.00

Macromolecule Entities
Molecule Chains Length Organism Details
transcarboxylase 5S subunit A 539 Propionibacterium freudenreichii EC#: 2.1.3.1 IUBMB
Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
OAA
Query on OAA

A OXALOACETATE ION
C4 H3 O5
KHPXUQMNIQBQEV-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CO
Query on CO

A COBALT (II) ION
Co
XLJKHNWPARRRJB-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.152
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 95.86 α = 90.00
b = 145.49 β = 90.00
c = 78.19 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-12-05
  • Released Date: 2004-09-07
  • Deposition author(s): Hall, P.R., Zheng, R., Antony, L., Pusztai-Carey, M., Carey, P.R., Yee, V.C.

Revision History

  • 2011-11-16
    Type: Atom occupancy | Details: Atom occupancy
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4