1REY

HUMAN LYSOZYME-N,N'-DIACETYLCHITOBIOSE COMPLEX

Structural Biology Knowledgebase: 1REY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.169

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1REY

Classification: HYDROLASE (O-GLYCOSYL)

Total Structure Weight: 15237.28

Macromolecule Entities
Molecule Chains Length Organism Details
LYSOZYME A 130 Homo sapiens EC#: 3.2.1.17 IUBMB
Details: HUMAN LYSOZYME, PH 4.5, N,N'-DIACETYLCHITOBIOSE COVALENTLY ATTACHED TO ASP 53 VIA AN ESTER BOND
Gene Name(s): LYZ Gene View LZM
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.169
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 58.63 α = 90.00
b = 60.76 β = 90.00
c = 33.12 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1996-08-21
  • Released Date: 1997-02-12
  • Deposition author(s): Muraki, M., Harata, K., Sugita, N., Sato, K.

Revision History

  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4