1R6Q

ClpNS with fragments


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 1R6Q

Classification: CHAPERONE / PROTEIN BINDING

Total Structure Weight: 58341.20

Macromolecule Entities
Molecule Chains Length Organism Details
ATP-dependent Clp protease ATP-binding subunit clpA A, B 143 Escherichia coli Fragment: N-terminal ClpA (residues 1-143)
Gene Name(s): clpA lopD b0882 JW0866
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
ATP-dependent Clp protease adaptor protein clpS C, D 106 Escherichia coli Gene Name(s): clpS yljA b0881 JW0865
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
YBT
Query on YBT

A, B BIS-(2-HYDROXYETHYL)AMINO-TRIS(HYDROXYMETHYL)METHANE YTTRIUM
C8 H19 N O5 Y
KSJVCBJVYSTBHB-UXIAQZODAR
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Y1
Query on Y1

C, D YTTRIUM ION
Y
KAJPZYFHSCFBCI-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.190
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 87.91 α = 90.00
b = 87.91 β = 90.00
c = 209.42 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-10-16
  • Released Date: 2005-02-15
  • Deposition author(s): Xia, D., Maurizi, M.R., Guo, F., Singh, S.K., Esser, L.

Revision History

  • Version 1_0: 2005-02-15

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Non-polymer description, Version format compliance