1R4W

Crystal structure of Mitochondrial class kappa glutathione transferase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.204

Literature

Macromolecules
Sequence Display for 1R4W

Classification: TRANSFERASE

Total Structure Weight: 103329.17

Macromolecule Entities
Molecule Chains Length Organism Details
Glutathione S-transferase, mitochondrial A, B, C, D 226 Rattus norvegicus EC#: 2.5.1.18 IUBMB
Gene Name(s): Gstk1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GSH
Query on GSH

A, B, C, D GLUTATHIONE
C10 H17 N3 O6 S
RWSXRVCMGQZWBV-WDSKDSINSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
GSH N/A in BindingDB
Kd: 90000 nM  BindingMOAD
Kd: 90000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.204
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 65.90 α = 90.00
b = 110.79 β = 101.96
c = 74.74 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-10-08
  • Released Date: 2004-02-03
  • Deposition author(s): Ladner, J.E., Parsons, J.F., Rife, C.L., Gilliland, G.L., Armstrong, R.N.

Revision History

  • Version 1_0: 2004-02-03

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance