1QYF

Crystal structure of matured green fluorescent protein R96A variant


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.145

Literature

Macromolecules
Sequence Display for 1QYF

Classification: LUMINESCENT PROTEIN

Total Structure Weight: 25758.18

Macromolecule Entities
Molecule Chains Length Organism Details
green-fluorescent protein A 230 Aequorea victoria Fragment: residues 1-229
Mutation: F64L, S66X, Y66X, G66X, R96A, F99S, M153T, V163A
Gene Name(s): GFP
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CRO
Query on CRO
A L-PEPTIDE LINKING C15 H17 N3 O5 THR , TYR , GLY

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.145
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 51.51 α = 90.00
b = 62.39 β = 90.00
c = 71.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-09-10
  • Released Date: 2003-09-30
  • Deposition author(s): Barondeau, D.P., Putnam, C.D., Kassmann, C.J., Tainer, J.A., Getzoff, E.D.

Revision History

  • 2008-04-29
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance