1QD9

Bacillus subtilis YABJ


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.166

Literature

Macromolecules
Sequence Display for 1QD9

Classification: GENE REGULATION

Total Structure Weight: 41629.32

Macromolecule Entities
Molecule Chains Length Organism Details
PURINE REGULATORY PROTEIN YABJ A, B, C 124 Bacillus subtilis Gene Name(s): yabJ BSU00480
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EMC
Query on EMC

B, C ETHYL MERCURY ION
C2 H5 Hg
MJOUBOKSWBMNGQ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
HG
Query on HG

A MERCURY (II) ION
Hg
BQPIGGFYSBELGY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACY
Query on ACY

A, B, C ACETIC ACID
C2 H4 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.166
  • Space Group: P 65

Unit Cell:

Length (Å) Angle (°)
a = 53.35 α = 90.00
b = 53.35 β = 90.00
c = 204.96 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-07-09
  • Released Date: 1999-11-26
  • Deposition author(s): Smith, J.L., Sinha, S., Rappu, P., Lange, S.C., Mantsala, P., Zalkin, H.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance