PARTIAL MODEL FOR 30S RIBOSOMAL SUBUNIT
DOI:10.2210/pdb1qd7/pdb   NDB ID: RR0001
1QD7
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Ribosome
    Structure Weight: 175572.44
    Molecule: CENTRAL FRAGMENT OF 16 S RNA
    Polymer: 1 Type: rna Length: 271
    Chains: A
    Fragment: RESIDUES 563-912
    Organism: Thermus thermophilus
    Molecule: END FRAGMENT OF 16 S RNA
    Polymer: 2 Type: rna Length: 88
    Chains: B
    Fragment: RESIDUES 1400-1500
    Organism: Thermus thermophilus
    Molecule: S4 RIBOSOMAL PROTEIN
    Polymer: 3 Type: protein Length: 159
    Chains: C
    Organism: Thermus thermophilus
    Gene Name: rpsD
    UniProtKB: Protein Feature View | Search PDB | P81288  
    Molecule: S5 RIBOSOMAL PROTEIN
    Polymer: 4 Type: protein Length: 145
    Chains: D
    Organism: Thermus thermophilus
    Gene Name: rpsE
    UniProtKB: Protein Feature View | Search PDB | P02357  
    Molecule: S6 RIBOSOMAL PROTEIN
    Polymer: 5 Type: protein Length: 97
    Chains: E
    Organism: Thermus thermophilus
    Gene Names: rpsF rps6
    UniProtKB: Protein Feature View | Search PDB | P23370  
    Molecule: S7 RIBOSOMAL PROTEIN
    Polymer: 6 Type: protein Length: 135
    Chains: F
    Organism: Thermus thermophilus
    Gene Names: rpsG rps7 TTHA1696
    UniProtKB: Protein Feature View | Search PDB | P17291  
    Molecule: S8 RIBOSOMAL PROTEIN
    Polymer: 7 Type: protein Length: 136
    Chains: G
    Organism: Thermus thermophilus
    Gene Names: rpsH TTHA1678
    UniProtKB: Protein Feature View | Search PDB | Q5SHQ2  
    Molecule: S15 RIBOSOMAL PROTEIN
    Polymer: 8 Type: protein Length: 85
    Chains: H
    Organism: Thermus thermophilus
    Gene Name: rpsO
    UniProtKB: Protein Feature View | Search PDB | P05766  
    Molecule: S17 RIBOSOMAL PROTEIN
    Polymer: 9 Type: protein Length: 89
    Chains: I
    Organism: Thermus thermophilus
    Gene Name: rpsQ
    UniProtKB: Protein Feature View | Search PDB | P23828  
    Molecule: S20 RIBOSOMAL PROTEIN
    Polymer: 10 Type: protein Length: 100
    Chains: J
    Organism: Thermus thermophilus
     
  •   Structure Validation Hide

    View the full validation report  

     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 2
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 3
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 4
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 5
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 6
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 7
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 8
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 9
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 10
    Scientific Name: Thermus thermophilus   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1A32   STRUCTURE OF RIBOSOMAL PROTEIN S15 
    1PKP   STRUCTURE OF RIBOSOMAL PROTEIN S5 
    1RIS   STRUCTURE OF RIBOSOMAL PROTEIN S6 
    1RSS   STRUCTURE OF RIBOSOMAL PROTEIN S7 
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    N
    Search 
    N C5 H11 O7 P rnaLinking
    UNK
    Search 
    UNK C4 H9 N O2 lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:RR0001
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
Downloadable viewers: