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Crystal structure of CDK2 with inhibitor
1PYE
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 34354.15
    Molecule: Cell division protein kinase 2
    Polymer: 1 Type: protein Length: 298
    Chains: A
    EC#: 2.7.11.22   
    Organism: Homo sapiens
    Gene Names: Gene View for CDK2 CDKN2
    UniProtKB: Protein Feature View | Search PDB | P24941  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Related PDB Entries Hide
    Identifier Details
    1PY5   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    PM1
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    PM1 C21 H13 F2 N3 O2
    [2-AMINO-6-(2,6-DIFLUORO-BENZOYL)-IMIDAZO[1,2- A]PYRIDIN-3-YL]-PHENYL-METHANONE
    PM1:1PYE
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    PM1
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    PM1
    IC50: 324 nM (100) - data from BindingDB  
    IC50: 320 nM - data from BindingMOAD  
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Zhang, F.,  Hamdouchi, C.

    Deposition:   2003-07-08
    Release:   2004-07-13
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.00
    R-Value: 0.240 (obs.)
    R-Free: 0.252
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 52.80 α = 90.00 
    b = 72.11 β = 90.00 
    c = 71.09 γ = 90.00