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The structure and DNA recognition of a bifunctional homing endonuclease and group I intron splicing factor
 
 
DOI:10.2210/pdb1p8k/pdb   NDB ID: PD0433
1P8K
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Hydrolase/dna
    Structure Weight: 48641.51
     
    Molecule:5'-D(P*GP*CP*GP*CP*GP*CP*TP*GP*AP*GP*GP*AP*GP*GP*TP*TP*TP*C)-3'
    Polymer:1Type:polydeoxyribonucleotideLength:18
    Chains:A
    Molecule:5'-D(P*TP*CP*TP*GP*TP*AP*AP*AP*GP*CP*GP*CP*A)-3'
    Polymer:2Type:polydeoxyribonucleotideLength:13
    Chains:B
    Molecule:5'-D(P*GP*CP*GP*CP*TP*TP*TP*AP*CP*AP*GP*AP*GP*AP*AP*A)-3'
    Polymer:3Type:polydeoxyribonucleotideLength:16
    Chains:C
    Molecule:5'-D(P*CP*CP*TP*CP*CP*TP*CP*AP*GP*CP*GP*CP*GP*CP*T)-3'
    Polymer:4Type:polydeoxyribonucleotideLength:15
    Chains:D
    Molecule:Intron-encoded endonuclease I-AniI
    Polymer:5Type:polypeptide(L)Length:254
    Chains:Z
    EC#:3.1.-.- Go to IUBMB EC entry  
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 3
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 4
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 5
    Scientific Name: Emericella nidulans Go to NCBI Taxonomy entry Expression System: Escherichia coli  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    MG     MAGNESIUM ION Mg 3DLigand Explorer Link out to Ligand Expos:MG Link out to SuperLigands:MG Link out to SuperHapten:MG
     
     
  •  
    Move Section Derived Data Hide
     
     
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Stoddard, B.L.,   Bolduc, J.M.

    Deposition:   2003-05-07
    Release:   2004-01-20
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 2.60
    R-Value: 0.247 (obs.)
    R-Free: 0.264
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 60.46 α = 90.00 
    b = 72.84 β = 108.21 
    c = 65.23 γ = 90.00