1P8C

Crystal structure of TM1620 (APC4843) from Thermotoga maritima

PDB DOI: https://doi.org/10.2210/pdb1P8C/pdb

Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Organism(s): Thermotoga maritima
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2003-05-06 Released: 2003-09-23
Deposition Author(s): Kim, Y., Joachimiak, A., Brunzelle, J.S., Korolev, S.V., Edwards, A., Xu, X., Savchenko, A., Midwest Center for Structural Genomics (MCSG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.30 Å
R-Value Free: 0.290
R-Value Work: 0.225
R-Value Observed: 0.225

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Crystal Structure Analysis of Thermotoga maritima protein TM1620 (APC4843)

Kim, Y., Joachimiak, A., Brunzelle, J.S., Korolev, S.V., Edwards, A., Xu, X., Savchenko, A.

To be published.

Macromolecule Content

Total Structure Weight: 99.14 kDa
Atom Count: 5,635
Modelled Residue Count: 696
Deposited Residue Count: 870
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
conserved hypothetical protein	A, B, C, D, E A, B, C, D, E, F	145	Thermotoga maritima	Mutation(s): 0
UniProt
Find proteins for Q9X1V5 (Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)) Explore Q9X1V5 Go to UniProtKB: Q9X1V5
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9X1V5
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.30 Å
R-Value Free: 0.290
R-Value Work: 0.225
R-Value Observed: 0.225
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 65.819	α = 90
b = 82.541	β = 90
c = 135.397	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
d*TREK	data reduction
HKL-2000	data reduction
HKL-2000	data scaling
ARP/wARP	model building

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2003-09-23

Deposition Author(s):

Brunzelle, J.S.

Midwest Center for Structural Genomics (MCSG)

Revision History (Full details and data files)

Version 1.0: 2003-09-23
Type: Initial release
Version 1.1: 2008-04-29
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.