1O9U

GLYCOGEN SYNTHASE KINASE 3 BETA COMPLEXED WITH AXIN PEPTIDE

Structural Biology Knowledgebase: 1O9U SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.233

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1O9U

Classification: TRANSFERASE / TRANSFERASE SUBSTRATE

Total Structure Weight: 41911.50

Macromolecule Entities
Molecule Chains Length Organism Details
GLYCOGEN SYNTHASE KINASE-3 BETA A 350 Homo sapiens EC#: 2.7.11.26 IUBMB
Fragment: RESIDUES 35-384
Mutation: H350L
Details: PHOSPHOTYROSINE AT A216
Gene Name(s): GSK3B Gene View
AXIN PEPTIDE B 18 Homo sapiens Fragment: RESIDUES 383-400
Gene Name(s): AXIN1 Gene View AXIN

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADZ
Query on ADZ

A 9-METHYL-9H-PURIN-6-AMINE
C6 H7 N5
WRXCXOUDSPTXNX-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PTR
Query on PTR
A L-PEPTIDE LINKING C9 H12 N O6 P TYR

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.233
  • Space Group: P 61 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 81.95 α = 90.00
b = 81.95 β = 90.00
c = 282.44 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-19
  • Released Date: 2003-08-15
  • Deposition author(s): Dajani, R., Pearl, L.H., Roe, S.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4
  • 2011-07-13
    Type: Atom nomenclature | Details: Atom nomenclature
  • 2011-07-13
    Type: Binding sites and description | Details: Binding sites and description
  • 2011-07-13
    Type: Non-polymer description | Details: Non-polymer description
  • 2011-07-13
    Type: Function and keywords | Details: Function and keywords
  • 2011-07-13
    Type: Linkage | Details: Linkage
  • 2011-07-13
    Type: Sequence database correspondence | Details: Sequence database correspondence
  • 2011-07-13
    Type: Polymer description | Details: Changed inhibitor presentation or chemistry