X-ray structure of the GluR2 ligand-binding core (S1S2J) in complex with the antagonist (S)-ATPO at 2.1 A resolution. DOI:10.2210/pdb1n0t/pdb

1N0T   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Biological Assembly 1 (gz) (A) Biological Assembly 2 (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Membrane Protein Structure Weight: 118619.89 Molecule: Glutamate receptor 2 Polymer: 1 Type: protein Length: 263 Chains: A, B, C, D Fragment: GluR2-flop ligand-binding core (S1S2J). Organism Rattus norvegicus Gene Names Gria2 Glur2 UniProtKB:   Protein Feature View | Search PDB | P19491         Source Hide Polymer: 1 Scientific Name: Rattus norvegicus   Taxonomy   Common Name: Norway rat Expression System: Escherichia coli bl21(de3)       Related PDB Entries Hide Identifier Details 1FTJ  GluR2 S1S2J in complex with the agonist glutamate.  1FTK  GluR2 S1S2I in complex with the agonist kainate.  1FTL  GluR2 S1S2J in complex with the antagonist DNQX.  1FTM  GluR2 S1S2J in complex with the agonist AMPA.  1FTO  GluR2 S1S2J in complex with the agonist kainate.  1FWO  GluR2 S1S2J in complex with the agonist kainate.  1GR2  GluR2 S1S2J in complex with the agonist kainate.  1LB8  Non-desensitizing form of GluR2 S1S2J-L483Y in complex with the agonist AMPA.  1LB9  GluR2 S1S2J-N775S in complex with Cyclothiazide.  1LBB  GluR2 S1S2J-N754D in complex with the agonist kainate.  1LBC  GluR2 S1S2J-N775S in complex with Cyclothiazide.  1M5B  GluR2 S1S2J in complex with the agonist 2-Me-Tet-AMPA.  1M5C  GluR2 S1S2J in complex with the agonist Br-HIBO.  1M5D  GluR2 S1S2J-Y702F in complex with the agonist Br-HIBO.  1M5E  GluR2 S1S2J in complex with the agonist ACPA.  1M5F  GluR2 S1S2J-Y702F in complex with the agonist ACPA.  1MM6  GluR2 S1S2J in complex with quisqualate.  1MM7  GluR2 S1S2J in complex with quisqualate.      Ligand Chemical Component Hide Identifier Formula Name Interactions ACT Search  Download  C2 H3 O2 ACETATE ION   Ligand Explorer AT1 Search  Download  C11 H19 N2 O7 P (S)-2-AMINO-3-(5-TERT-BUTYL-3-(PHOSPHONOMETHOXY)- 4-ISOXAZOLYL)PROPIONIC ACID   Ligand Explorer SO4 Search  Download  O4 S SULFATE ION   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) AT1 Search  Download  N/A in BindingDB IC50: 12200 nM - data from BindingMOAD   IC50: 12200 nM - data from PDBbind       External Domain Annotations Hide SCOP Classification v1.75: 4 Domains - data from SCOP   CATH Classification v3.4.0: 8 Domains - data from CATH   Pfam Classification: 1 Domain - data from Pfam   GO Terms: 44 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly 1            View in 3D More Images... Biological assembly 1 assigned by authorsBiological assembly 2 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Hogner, A.,  Greenwood, J.R.,  Liljefors, T.,  Lunn, M.-L.,  Egebjerg, J.,  Larsen, I.K.,  Gouaux, E.,  Kastrup, J.S. Deposition:   2002-10-15 Release:   2003-03-04 Last Modified (REVDAT):   2011-12-21     Revision History    Hide Mouse over text for details 2011-12-21 Sequence database correspondence 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data: N/A Resolution[Å]:   2.10 R-Value: 0.194 (work) R-Free: 0.245 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 65.97 α = 90.00  b = 89.06 β = 90.00  c = 194.86 γ = 90.00