1MP5

Y177F VARIANT OF S. ENTERICA RmlA

Structural Biology Knowledgebase: 1MP5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.75 Å
  • R-Value Free: 0.290
  • R-Value Work: 0.230

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1MP5

Classification: TRANSFERASE

Total Structure Weight: 131910.64

Macromolecule Entities
Molecule Chains Length Organism Details
Y177F VARIANT OF S. ENTERICA RmlA BOUND TO UDP-GLUCOSE A, B, C, D 292 Salmonella enterica EC#: 2.7.7.24 IUBMB
Mutation: K26Q, K154A, Y177F
Gene Name(s): rmlA rfbA STM2095
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UPG
Query on UPG

A, B, C, D URIDINE-5'-DIPHOSPHATE-GLUCOSE
URIDINE-5'-MONOPHOSPHATE GLUCOPYRANOSYL-MONOPHOSPHATE ESTER (Synonym)
C15 H24 N2 O17 P2
HSCJRCZFDFQWRP-JZMIEXBBSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.75 Å
  • R-Value Free: 0.290
  • R-Value Work: 0.230
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 91.70 α = 90.00
b = 111.22 β = 90.00
c = 131.15 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-09-11
  • Released Date: 2002-10-09
  • Deposition author(s): Barton, W.A., Biggins, J.B., Jiang, J., Thorson, J.S., Nikolov, D.B.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4