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Crystal structure of influenza virus neuraminidase in complex with BCX-1812
 
 
DOI:10.2210/pdb1l7f/pdb
1L7F
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 46289.68
     
    Molecule:neuraminidase
    Polymer:1Type:polypeptide(L)Length:388
    Chains:A
    EC#:3.2.1.18 Go to IUBMB EC entry  
    Fragment:integral membrane protein, membrane stalk cleaved by pronase releasing fully active residues 82-468
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Influenza a virus Go to NCBI Taxonomy entry  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 3
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    1L7G  Crystal structure of E119G mutant influenza virus neuraminidase in complex with BCX-1812 
    1L7H  Crystal structure of R292K mutant influenza virus neuraminidase in complex with BCX-1812 
    1NNC  Crystal structure of influenza virus neuraminidase in complex with zanamivir 
    2QWK  Crystal structure of influenza virus neuraminidase in complex with tamiflu 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    BCZ     3-(1-ACETYLAMINO-2-ETHYL-BUTYL)-4-GUANIDINO- 2-HYDROXY
    -CYCLOPENTANECARBOXYLIC ACID     		C15 H28 N4 O4 3DLigand Explorer Link out to Ligand Expos:BCZ Link out to SuperLigands:BCZ Link out to SuperHapten:BCZ
    BMA     BETA-D-MANNOSE C6 H12 O6 3DLigand Explorer Link out to Ligand Expos:BMA Link out to SuperLigands:BMA Link out to SuperHapten:BMA
    CA     CALCIUM ION Ca 3DLigand Explorer Link out to Ligand Expos:CA Link out to SuperLigands:CA Link out to SuperHapten:CA
    GOL     GLYCEROL C3 H8 O3 3DLigand Explorer Link out to Ligand Expos:GOL Link out to SuperLigands:GOL Link out to SuperHapten:GOL
    MAN     ALPHA-D-MANNOSE C6 H12 O6 3DLigand Explorer Link out to Ligand Expos:MAN Link out to SuperLigands:MAN Link out to SuperHapten:MAN
    NAG     N-ACETYL-D-GLUCOSAMINE C8 H15 N O6 3DLigand Explorer Link out to Ligand Expos:NAG Link out to SuperLigands:NAG Link out to SuperHapten:NAG
     
     
  •  
    Move Section Derived Data Hide
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Smith, B.J.,   McKimm-Breshkin, J.L.,   McDonald, M.,   Fernley, R.T.,   Varghese, J.N.,   Colman, P.M.

    Deposition:   2002-03-15
    Release:   2002-05-29
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 1.80
    R-Value: 0.153 (work)
    R-Free: 0.187
    Space Group: I 4 3 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 181.12 α = 90.00 
    b = 181.12 β = 90.00 
    c = 181.12 γ = 90.00