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The 2.5 Angstrom resolution crystal structure of the human PPARalpha ligand binding domain bound with GW409544 and a co-activator peptide.
1K7L
Primary Citation
 
 
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  •   Molecular Description Hide
    Classification: Transcription
    Structure Weight: 142872.45
    Molecule: Peroxisome proliferator activated receptor alpha
    Polymer: 1 Type: protein Length: 288
    Chains: A, C, E, G
    Fragment: ligand binding domain - residues 192 - 468
    Organism Homo sapiens
    Gene Names PPARA NR1C1 PPAR
    UniProtKB:   Protein Feature View | Search PDB | Q07869  
    Molecule: steroid receptor coactivator
    Polymer: 2 Type: protein Length: 21
    Chains: B, D, F, H
    EC#: 2.3.1.48   
    Fragment: src-1 peptide
    Gene Names NCOA1 BHLHE74 SRC1
    UniProtKB:   Protein Feature View | Search PDB | Q15788  
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1fm6   
    1fm9   
    1k74   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    544
    Search 
    Download      		544 C31 H30 N2 O5
    2-(1-METHYL-3-OXO-3-PHENYL-PROPYLAMINO)-3- {4-[2-(5-METHYL-2-PHENYL-OXAZOL-4-YL)-ETHOXY]- PHENYL}-PROPIONIC ACID
    		544:1K7L
    YT3
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    Download      		YT3 Y
    YTTRIUM (III) ION
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    544
    Search 
    Download      		544
    EC50: 2 - 10 nM (100) - data from BindingDB  
    Ki: 2 nM (100) - data from BindingDB  
    N/Ain BindingMoad
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
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  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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