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CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN OF HUMAN PPAR-GAMMA IN COMPLEX WITH THE AGONIST AZ 242
1I7I
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription
    Structure Weight: 67236.33
    Molecule: PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA
    Polymer: 1 Type: protein Length: 292
    Chains: A, B
    Fragment: LIGAND BINDING DOMAIN
    Organism: Homo sapiens
    Gene Names: Gene View for PPARG NR1C3
    UniProtKB: Protein Feature View | Search PDB | P37231  
     
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  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
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    Identifier Details
    1I7G  Crystal Structure of the Ligand Binding Domain from human PPAR-alpha in complex with the agonist AZ 242 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    AZ2
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    AZ2 C20 H24 O7 S
    (2S)-2-ETHOXY-3-[4-(2-{4-[(METHYLSULFONYL)OXY]PHENYL}ETHOXY)PHENYL]PROPANOIC ACID
    AZ2:1I7I
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    AZ2
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    AZ2
    EC50: 13 - 3528 nM (98 - 100) - data from BindingDB  
    IC50: 350 nM (100) - data from BindingDB  
    Ki: 18 - 200 nM (98 - 100) - data from BindingDB  
    N/Ain BindingMoad
    N/Ain PDBbind
     
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Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Petersen, J.F.W.,  Cronet, P.,  Folmer, R.,  Blomberg, N.,  Sjoblom, K.,  Karlsson, U.,  Lindstedt, E.-L.,  Bamberg, K.

    Deposition:   2001-03-09
    Release:   2002-03-09
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.35
    R-Value: 0.238 (work)
    R-Free: 0.284
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 92.93 α = 90.00 
    b = 61.78 β = 101.52 
    c = 118.98 γ = 90.00