CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN OF HUMAN PPAR-GAMMA IN COMPLEX WITH THE AGONIST AZ 242 DOI:10.2210/pdb1i7i/pdb

1I7I   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Biological Assembly 1 (gz) (A) Biological Assembly 2 (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Transcription Structure Weight: 67236.33 Molecule: PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA Polymer: 1 Type: protein Length: 292 Chains: A, B Fragment: LIGAND BINDING DOMAIN Organism Homo sapiens Gene Names PPARG NR1C3 UniProtKB:   Protein Feature View | Search PDB | P37231         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1I7G  Crystal Structure of the Ligand Binding Domain from human PPAR-alpha in complex with the agonist AZ 242      Ligand Chemical Component Hide Identifier Formula Name Interactions AZ2 Search  Download  C20 H24 O7 S (2S)-2-ETHOXY-3-[4-(2-{4-[(METHYLSULFONYL)OXY]PHENYL}ETHOXY)PHENYL]PROPANOIC ACID   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) AZ2 Search  Download  EC50: 13 - 3528 nM (98 - 100) - data from BindingDB   IC50: 350 nM (100) - data from BindingDB   Ki: 18 - 200 nM (98 - 100) - data from BindingDB   N/A in BindingMoad IC50: 200 nM - data from PDBbind       External Domain Annotations Hide SCOP Classification v1.75: 2 Domains - data from SCOP   CATH Classification v3.4.0: 2 Domains - data from CATH   Pfam Classification: 1 Domain - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly 1            View in 3D More Images... Biological assembly 1 assigned by authorsBiological assembly 2 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Petersen, J.F.W.,  Cronet, P.,  Folmer, R.,  Blomberg, N.,  Sjoblom, K.,  Karlsson, U.,  Lindstedt, E.-L.,  Bamberg, K. Deposition:   2001-03-09 Release:   2002-03-09 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data: N/A Resolution[Å]:   2.35 R-Value: 0.238 (work) R-Free: 0.284 Space Group: C 2 Unit Cell:   Length [Å] Angles [°] a = 92.93 α = 90.00  b = 61.78 β = 101.52  c = 118.98 γ = 90.00