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CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A POLYPURINE TRACT RNA:DNA
DOI:10.2210/pdb1hys/pdb   NDB ID: PH0003
1HYS
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase/dna RNA Hybrid
    Structure Weight: 173781.63
    Molecule: 5'-R(*UP*CP*AP*GP*CP*CP*AP*CP*UP*UP*UP*UP*UP*AP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'
    Polymer: 1 Type: rna Length: 23
    Chains: E
    Molecule: 5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*TP*AP*AP*AP*AP*AP*GP*TP*GP*GP*CP*TP*G)-3'
    Polymer: 2 Type: dna Length: 22
    Chains: F
    Molecule: HIV-1 REVERSE TRANSCRIPTASE
    Polymer: 3 Type: protein Length: 553
    Chains: A
    EC#: 2.7.7.49    2.7.7.7    3.1.26.13   
    Fragment: P66
    Mutation: C280S
    Organism: Human immunodeficiency virus 1
    Gene Name: gag-pol
    UniProtKB: Protein Feature View | Search PDB | P03366  
    Molecule: HIV-1 REVERSE TRANSCRIPTASE
    Polymer: 4 Type: protein Length: 425
    Chains: B
    EC#: 2.7.7.49    2.7.7.7    3.1.26.13   
    Fragment: P51
    Mutation: C280S
    Organism: Human immunodeficiency virus 1
    Gene Name: gag-pol
    UniProtKB: Protein Feature View | Search PDB | P03366  
    Molecule: FAB-28 MONOCLONAL ANTIBODY FRAGMENT LIGHT CHAIN
    Polymer: 5 Type: protein Length: 214
    Chains: C
    Organism: Mus musculus
    Molecule: FAB-28 MONOCLONAL ANTIBODY FRAGMENT HEAVY CHAIN
    Polymer: 6 Type: protein Length: 220
    Chains: D
    Organism: Mus musculus
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Human immunodeficiency virus 1   Taxonomy   Expression System: Escherichia coli  
    Polymer: 4
    Scientific Name: Human immunodeficiency virus 1   Taxonomy   Expression System: Escherichia coli  
    Polymer: 5
    Scientific Name: Mus musculus   Taxonomy   Common Name: House mouse  
    Polymer: 6
    Scientific Name: Mus musculus   Taxonomy   Common Name: House mouse  
     
  •   Related PDB Entries Hide
    Identifier Details
    1DLO  Structure of unliganded HIV-1 reverse transcriptase at 2.7 A resolution: implications of conformational changes for polymerization and inhibition mechanisms 
    1RTD  Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistance 
    2HMI  Crystal structure of HIV-1 Reverse Transcriptase in complex with DNA:DNA 
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PH0003
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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