1HW9

COMPLEX OF THE CATALYTIC PORTION OF HUMAN HMG-COA REDUCTASE WITH SIMVASTATIN

Structural Biology Knowledgebase: 1HW9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.33 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.222

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1HW9

Classification: oxidoreductase

Total Structure Weight: 203970.09

Macromolecule Entities
Molecule Chains Length Organism Details
HMG-COA REDUCTASE A, B, C, D 467 Homo sapiens EC#: 1.1.1.34 IUBMB
Fragment: CATALYTIC PORTION
Mutation: M485I
Details: COMPLEXED WITH CHEMICALLY MODIFIED COMPACTIN (MEVASTATIN), NATURAL PRODUCT OF PENICILLIUM CITRINUM
Gene Name(s): HMGCR Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SIM
Query on SIM

A, B, C Simvastatin acid
DIMETHYL-COMPACTIN (Synonym)
C25 H40 O6
XWLXKKNPFMNSFA-HGQWONQESA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ADP
Query on ADP

A, B, C, D ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
SIM EC50: 6.2 nM (91) BindingDB
IC50: 4.3 - 18 nM (91) BindingDB

IC50: 11 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.33 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.222
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.55 α = 90.00
b = 172.82 β = 117.56
c = 80.03 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-01-09
  • Released Date: 2001-05-11
  • Deposition author(s): Istvan, E.S., Deisenhofer, J.

Revision History

  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4