ATOMIC RESOLUTION STRUCTURES OF TRYPSIN PROVIDE INSIGHT INTO STRUCTURAL RADIATION DAMAGE DOI:10.2210/pdb1hj9/pdb

1HJ9   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase Structure Weight: 23837.88 Molecule: BETA-TRYPSIN Polymer: 1 Type: protein Length: 223 Chains: A EC#: 3.4.21.4    Fragment: RESIDUES 21-243 Organism Bos taurus UniProtKB:   Protein Feature View | Search PDB | P00760         Source Hide Polymer: 1 Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine       Related PDB Entries Hide Identifier Details 1AQ7  TRYPSIN WITH INHIBITOR AERUGINOSIN 98-B  1AUJ  BOVINE TRYPSIN COMPLEXED TO META-CYANO- BENZYLIC INHIBITOR  1AZ8  BOVINE TRYPSIN COMPLEXED TO BIS-PHENYLAMIDINE INHIBITOR  1BJU  BETA-TRYPSIN COMPLEXED WITH ACPU  1BJV  BETA-TRYPSIN COMPLEXED WITH APPU  1BTP  MOL_ID: 1; MOLECULE: BETA-TRYPSIN; CHAIN: NULL; EC: 3.4.21.4; HETEROGEN: N-[3-[4 -[4-(AMIDINOPHENOXY)-CARBONYL]PHENYL]-2- METHYL-2-PROPENOYL]-N-ALLYLGLYCINE METHANESULFONATE  1C1N  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C1O  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C1P  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C1Q  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C1R  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C1S  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C1T  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C2D  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C2E  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C2F  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C2G  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C2H  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C2I  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C2J  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C2K  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OFSERINE PROTEASES  1C2L  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C2M  RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES  1C5P  STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR  1C5Q  STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR  1C5R  STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR  1C5S  STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR  1C5T  STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR  1C5U  STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR  1C5V  STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR  1C9T  COMPLEX OF BDELLASTASIN WITH BOVINE TRYPSIN  1CE5  BOVINE PANCREAS BETA-TRYPSIN IN COMPLEX WITH BENZAMIDINE  1CU7  BOVINE TRYPSIN COMPLEXED WITH 2-[3-AMINO( IMINOMETHYL) PHENOXY]-6-[3-(AMINOMETHYL) PHENOXY]-3,5-DIFLUORO-4- METHYLPYRIDINE (ZK -806299), BINDING MODEL FROM DOUBLE REDOR NMR AND MD SIMULATIONS  1CU8  BOVINE TRYPSIN COMPLEXED WITH 2,6-BIS[3- AMINO(IMINO)METHYL PHENOXY]-3,5-DIFLUORO-4 -METHYLPYRIDINE (ZK-805623), BINDING MODEL FROM DOUBLE REDOR NMR AND MD SIMULATIONS  1CU9  BOVINE TRYPSIN COMPLEXED WITH 2,6-BIS[3- AMINO(IMINO)METHYL PHENOXY]-3,5-DIFLUORO-4 -METHYLPYRIDINE (ZK-805623), BINDING MODEL FROM DOUBLE REDOR NMR AND MD SIMULATIONS  1D6R  CRYSTAL STRUCTURE OF CANCER CHEMOPREVENTIVE BOWMAN-BIRK INHIBITOR IN TERNARY COMPLEX WITH BOVINE TRYPSIN AT 2.3 A RESOLUTION. STRUCTURAL BASIS OF JANUS-FACED SERINE PROTEASE INHIBITOR SPECIFICITY  1EZX  CRYSTAL STRUCTURE OF A SERPIN:PROTEASE COMPLEX  1F0T  BOVINE TRYPSIN COMPLEXED WITH RPR131247  1F0U  BOVINE TRYPSIN COMPLEXED WITH RPR128515  1F2S  CRYSTAL STRUCTURE OF THE COMPLEX FORMED BETWEEN BOVINE BETA- TRYPSIN AND MCTI-A, A TRYPSIN INHIBITOR OF SQUASH FAMILY AT 1. 8 A RESOLUTION  1G9I  CRYSTAL STRUCTURE OF BETA-TRYSIN COMPLEX IN CYCLOHEXANE  1JRS  HEMIACETAL COMPLEX BETWEEN LEUPEPTIN AND TRYPSIN  1JRT  HEMIACETAL COMPLEX BETWEEN LEUPEPTIN AND TRYPSIN  1MAX  BETA-TRYPSIN PHOSPHONATE INHIBITED  1MAY  BETA-TRYPSIN PHOSPHONATE INHIBITED  1MTS  FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN  1MTU  FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN  1MTV  FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN  1MTW  FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN  1QA0  BOVINE TRYPSIN 2-AMINOBENZIMIDAZOLE COMPLEX  1QB1  BOVINE TRYPSIN WITH 1-[2-[5-[AMINO(IMINO) METHYL]-2- HYDROXYPHENOXY]-6-[3-(4,5- DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY ]PYRIDIN-4-YL]PIPERIDINE-3-CARBOXYLIC ACID (ZK- 806974)  1QB6  BOVINE TRYPSIN 3,3'-[3,5-DIFLUORO-4- METHYL-2, 6- PYRIDINEDIYLBIS(OXY)]BIS( BENZENECARBOXIMIDAMIDE) (ZK-805623) COMPLEX  1QB9  BOVINE TRYPSIN 7-[[2-[[1-(1-IMINOETHYL) PIPERIDIN-4-YL]OXY]- 9H-CARBOZOL-9-YL] METHYL]NAPHTHALENE-2-CARBOXIMIDAMIDE (ZK- 806450) COMPLEX  1QBN  BOVINE TRYPSIN 2-[AMINO(IMINO)METHYL]-2- HYDROXYPHENOXY]-6- [3-(4,5-DIHYDRO-1H- IMIDAZOL-2-YL)PHENOXY]PYRIDINE-4- CARBOXYLIC ACID (ZK-806688) COMPLEX  1QBO  BOVINE TRYPSIN 7-[[6-[[1-(1-IMINOETHYL) PIPERIDIN-4-YL]OXY]- 2-METHYL-BENZIMIDAZOL- 1-YL]METHYL]NAPHTHALENE-2- CARBOXIMIDAMID ZK -806711 INHIBITOR COMPLEX  1QCP  CRYSTAL STRUCTURE OF THE RWJ-51084 BOVINE PANCREATIC BETA- TRYPSIN AT 1.8 A  1QL7  FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN  1QL8  FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN  1SBW  CRYSTAL STRUCTURE OF MUNG BEAN INHIBITOR LYSINE ACTIVE FRAGMENT COMPLEX WITH BOVINE BETA-TRYPSIN AT 1.8A RESOLUTION  1SFI  HIGH RESOLUTION STRUCTURE OF A POTENT, CYCLIC PROTEASE INHIBITOR FROM SUNFLOWER SEEDS  1TAW  BOVINE TRYPSIN COMPLEXED TO APPI  1TIO  HIGH PACKING DENSITY FORM OF BOVINE BETA- TRYPSIN IN CYCLOHEXANE  1XUF  TRYPSIN-BABIM-ZN+2, PH 8.2  1XUG  TRYPSIN-BABIM-ZN+2, PH 8.2  1XUH  TRYPSIN-KETO-BABIM-CO+2, PH 8.2  1XUI  TRYPSIN-KETO-BABIM, ZN+2-FREE, PH 8.2  1XUJ  TRYPSIN-KETO-BABIM-ZN+2, PH 8.2  1XUK  TRYPSIN-BABIM-SULFATE, PH 5.9  1YYY  TRYPSIN INHIBITORS WITH RIGID TRIPEPTIDYL ALDEHYDES  1ZZZ  TRYPSIN INHIBITORS WITH RIGID TRIPEPTIDYL ALDEHYDES  2BTC  BOVINE TRYPSIN IN COMPLEX WITH SQUASH SEED INHIBITOR (CUCURBITA PEPO TRYPSIN INHIBITOR II )  2BZA  BOVINE PANCREAS BETA-TRYPSIN IN COMPLEX WITH BENZYLAMINE  2TIO  LOW PACKING DENSITY FORM OF BOVINE BETA- TRYPSIN IN CYCLOHEXANE  3BTD  THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN THE BOVINE BETA-TRYPSIN AND TEN P1 VARIANTS OF BPTI.  3BTE  THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI.  3BTF  THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI.  3BTG  THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI  3BTH  THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI  3BTK  THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI  3BTM  THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI  3BTQ  THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI  3BTT  THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI  3BTW  THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI  5PTP  STRUCTURE OF HYDROLASE (SERINE PROTEINASE)      Ligand Chemical Component Hide Identifier Formula Name Interactions ANL Search  Download  C6 H7 N ANILINE   Ligand Explorer CA Search  Download  Ca CALCIUM ION   Ligand Explorer GOL Search  Download  C3 H8 O3 GLYCEROL   Ligand Explorer SO4 Search  Download  O4 S SULFATE ION   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 1 Domain - data from SCOP   CATH Classification v3.4.0: 2 Domains - data from CATH   Pfam Classification: 1 Domain - data from Pfam   GO Terms: 9 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). 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Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PQS (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Leiros, H.-K.S.,  Mcsweeney, S.M.,  Smalas, A.O. Deposition:   2001-01-10 Release:   2002-01-04 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors Resolution[Å]:   0.95 R-Value: 0.117 (obs.) R-Free: 0.140 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 54.06 α = 90.00  b = 56.81 β = 90.00  c = 66.28 γ = 90.00      Molecule of the Month Hide Thrombin Trypsin Serpins Tissue Factor Fibrin