1H8P

BULL SEMINAL PLASMA PDC-109 FIBRONECTIN TYPE II MODULE

Structural Biology Knowledgebase: 1H8P SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.82 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.207

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1H8P

Classification: PHOSPHORYLCHOLINE-BINDING PROTEIN

Total Structure Weight: 26359.46

Macromolecule Entities
Molecule Chains Length Organism Details
SEMINAL PLASMA PROTEIN PDC-109 A, B 109 Bos taurus Fragment: RESIDUES 26-134
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PC
Query on PC

A, B PHOSPHOCHOLINE
C5 H15 N O4 P
YHHSONZFOIEMCP-UHFFFAOYSA-O
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.82 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.207
  • Space Group: P 3 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 90.88 α = 90.00
b = 90.88 β = 90.00
c = 52.21 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-02-14
  • Released Date: 2002-04-12
  • Deposition author(s): Wah, D.A., Fernandez-Tornero, C., Calvete, J.J., Romero, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4