CRYSTAL STRUCTURE OF THE RIBOSOME AT 5.5 A RESOLUTION. THIS FILE, 1GIY, CONTAINS THE 50S RIBOSOME SUBUNIT. THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES ARE IN THE FILE 1GIX DOI:10.2210/pdb1giy/pdb   NDB ID: RR0032

1GIY   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Split Entry The asymmetric unit for this structure is composed of multiple PDB entries: 1GIX   1GIY     Download All Files      Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Ribosome Structure Weight: 1344684.23 Molecule: 50S 23S RIBOSOMAL RNA Polymer: 1 Type: rna Length: 2916 Chains: A Organism Thermus thermophilus Molecule: 50S 5S RIBOSOMAL RNA Polymer: 2 Type: rna Length: 123 Chains: B Organism Thermus thermophilus Molecule: 50S RIBOSOMAL PROTEIN L1 Polymer: 3 Type: protein Length: 228 Chains: C Organism Thermus thermophilus Gene Names rplA TTHA0246 UniProtKB:   Protein Feature View | Search PDB | Q5SLP7     Molecule: 50S RIBOSOMAL PROTEIN L2 Polymer: 4 Type: protein Length: 178 Chains: D Organism Thermus thermophilus Gene Names rplB TTHA1689 UniProtKB:   Protein Feature View | Search PDB | P60405     Molecule: 50S RIBOSOMAL PROTEIN L3 Polymer: 5 Type: protein Length: 338 Chains: E Organism Thermus thermophilus Gene Names rplC TTHA1692 UniProtKB:   Protein Feature View | Search PDB | Q5SHN8     Molecule: 50S RIBOSOMAL PROTEIN L4 Polymer: 6 Type: protein Length: 246 Chains: F Organism Thermus thermophilus Gene Names rplD TTHA1691 UniProtKB:   Protein Feature View | Search PDB | Q5SHN9     Molecule: 50S RIBOSOMAL PROTEIN L5 Polymer: 7 Type: protein Length: 176 Chains: G Organism Thermus thermophilus Gene Names rplE TTHA1680 UniProtKB:   Protein Feature View | Search PDB | Q5SHQ0     Molecule: 50S RIBOSOMAL PROTEIN L6 Polymer: 8 Type: protein Length: 177 Chains: H Organism Thermus thermophilus Gene Names rplF TTHA1677 UniProtKB:   Protein Feature View | Search PDB | Q5SHQ3     Molecule: 50S RIBOSOMAL PROTEIN L7/L12 Polymer: 9 Type: protein Length: 128 Chains: I, J Organism Thermus thermophilus Gene Names rplL TTHA0210 UniProtKB:   Protein Feature View | Search PDB | Q8VVE2     Molecule: 50S RIBOSOMAL PROTEIN L9 Polymer: 10 Type: protein Length: 149 Chains: K Organism Thermus thermophilus Gene Names rplI TTHA0242 UniProtKB:   Protein Feature View | Search PDB | Q5SLQ1     Molecule: 50S RIBOSOMAL PROTEIN L11 Polymer: 11 Type: protein Length: 141 Chains: L Organism Thermus thermophilus Gene Names rplK TTHA0247 UniProtKB:   Protein Feature View | Search PDB | Q5SLP6     Molecule: 50S RIBOSOMAL PROTEIN L13 Polymer: 12 Type: protein Length: 145 Chains: M Organism Thermus thermophilus Gene Names rplM TTHA1465 UniProtKB:   Protein Feature View | Search PDB | P60488     Molecule: 50S RIBOSOMAL PROTEIN L14 Polymer: 13 Type: protein Length: 122 Chains: N Organism Thermus thermophilus Gene Names rplN TTHA1682 UniProtKB:   Protein Feature View | Search PDB | Q5SHP8     Molecule: 50S RIBOSOMAL PROTEIN L15 Polymer: 14 Type: protein Length: 164 Chains: O Organism Thermus thermophilus Gene Names rplO TTHA1673 UniProtKB:   Protein Feature View | Search PDB | Q5SHQ7     Molecule: 50S RIBOSOMAL PROTEIN L16 Polymer: 15 Type: protein Length: 138 Chains: P Organism Thermus thermophilus Gene Names rplP TTHA1685 UniProtKB:   Protein Feature View | Search PDB | P60489     Molecule: 50S RIBOSOMAL PROTEIN L18 Polymer: 16 Type: protein Length: 186 Chains: Q Organism Thermus thermophilus Gene Names rplR TTHA1676 UniProtKB:   Protein Feature View | Search PDB | Q5SHQ4     Molecule: 50S RIBOSOMAL PROTEIN L19 Polymer: 17 Type: protein Length: 66 Chains: R Organism Thermus thermophilus Gene Names rplS TTHA1031 UniProtKB:   Protein Feature View | Search PDB | P60490     Molecule: 50S RIBOSOMAL PROTEIN L22 Polymer: 18 Type: protein Length: 113 Chains: S Organism Thermus thermophilus Gene Names rplV TTHA1687 UniProtKB:   Protein Feature View | Search PDB | Q5SHP3     Molecule: 50S RIBOSOMAL PROTEIN L23 Polymer: 19 Type: protein Length: 84 Chains: T Organism Thermus thermophilus Gene Names rplW TTHA1690 UniProtKB:   Protein Feature View | Search PDB | Q5SHP0     Molecule: 50S RIBOSOMAL PROTEIN L24 Polymer: 20 Type: protein Length: 119 Chains: U Organism Thermus thermophilus Gene Names rplX TTHA1681 UniProtKB:   Protein Feature View | Search PDB | Q5SHP9     Molecule: 50S RIBOSOMAL PROTEIN L25 Polymer: 21 Type: protein Length: 94 Chains: V Organism Thermus thermophilus Gene Names rplY rpl25 rptL5 TTHA1589 UniProtKB:   Protein Feature View | Search PDB | Q5SHZ1     Molecule: 50S RIBOSOMAL PROTEIN L29 Polymer: 22 Type: protein Length: 70 Chains: W Organism Thermus thermophilus Gene Names rpmC TTHA1684 UniProtKB:   Protein Feature View | Search PDB | Q5SHP6     Molecule: 50S RIBOSOMAL PROTEIN L30 Polymer: 23 Type: protein Length: 60 Chains: X Organism Thermus thermophilus Gene Names rpmD TTHA1674 UniProtKB:   Protein Feature View | Search PDB | Q5SHQ6         Source Hide Polymer: 1 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 2 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 3 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 4 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 5 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 6 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 7 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 8 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 9 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 10 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 11 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 12 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 13 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 14 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 15 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 16 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 17 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 18 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 19 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 20 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 21 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 22 Scientific Name: Thermus thermophilus   Taxonomy     Polymer: 23 Scientific Name: Thermus thermophilus   Taxonomy         Related PDB Entries Hide Identifier Details 486D  7.5A model of 70S ribosome      External Domain Annotations Hide SCOP Classification v1.75: 22 Domains - data from SCOP   Pfam Classification: 27 Domains - data from Pfam   GO Terms: 145 Terms - data from GO      Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: RR0032     Data in orange boxes are gathered from external resources (when available). 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Biological Assembly            View in 3D More Images... Composite of PDB entries (1GIX and 1GIY)         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Yusupov, M.M.,  Yusupova, G.Z.,  Baucom, A.,  Lieberman, K.,  Earnest, T.N.,  Cate, J.H.D.,  Noller, H.F. Deposition:   2001-03-30 Release:   2001-05-04 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data: N/A Resolution[Å]:   5.50 R-Value: n/a R-Free: n/a Space Group: I 4 2 2 Unit Cell:   Length [Å] Angles [°] a = 507.20 α = 90.00  b = 507.20 β = 90.00  c = 803.66 γ = 90.00      Molecule of the Month Hide Ribosomal Subunits Ribosome Transfer-Messenger RNA Ricin