HIV-1 YU2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B     DOI:10.2210/pdb1g9n/pdb

1G9N Display Files close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header) Download Files close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Biological Assembly (gz) (A) Print this Page Share this Page close Email Delicious Stumble Google More... Link this Page

Primary Citation       Molecular Description Hide Classification: Viral Protein/immune System Structure Weight: 106405.24   Molecule: ENVELOPE GLYCOPROTEIN GP120 Polymer: 1 Type: polypeptide(L) Length: 313 Chains: G Fragment: CORE Mutation: VARIABLE LOOPS SUBSTITUTED Molecule: T-CELL SURFACE GLYCOPROTEIN CD4 Polymer: 2 Type: polypeptide(L) Length: 185 Chains: C Fragment: D1D2, N-TERMINAL TWO DOMAIN FRAGMENT Mutation: S184N, I185T Molecule: ANTIBODY 17B, LIGHT CHAIN Polymer: 3 Type: polypeptide(L) Length: 214 Chains: L Fragment: ANTIGEN-BINDING FRAGMENT, FAB Molecule: ANTIBODY 17B, HEAVY CHAIN Polymer: 4 Type: polypeptide(L) Length: 229 Chains: H Fragment: ANTIGEN-BINDING FRAGMENT, FAB       Source Hide Polymer: 1 Scientific Name: Human immunodeficiency virus 1 Expression System: Drosophila melanogaster   Polymer: 2 Scientific Name: Homo sapiens Common Name: Human Expression System: Cricetulus griseus   Polymer: 3 Scientific Name: Homo sapiens Common Name: Human Expression System: Mus musculus   Polymer: 4 Scientific Name: Homo sapiens Common Name: Human Expression System: Mus musculus         Related PDB Entries Hide Id Details 1g9m  1G9M CONTAINS THE SAME TERNARY COMPLEX FROM A LABORATORY-ADAPTED ISOLATE.        Ligand Chemical Component Hide Identifier Name Formula Interaction View Links NAG     N-ACETYL-D-GLUCOSAMINE C8 H15 N O6 Ligand Explorer NDG     2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE C8 H15 N O6 Ligand Explorer       Derived Data Hide SCOP Classification v1.75 - (7 Domains) CATH Classification v3.2.0 - (7 Domains) PFAM Classification - (6 Domains) GO Terms - (52 Terms)     Reset Layout

Biological Assembly     More Images... View in Jmol Other Viewers close KiNG WebMol QuickPDB FirstGlance Kiosk SimpleViewer Protein Workshop Ligand Explorer Biological assembly assigned by authors         Deposition Summary Hide Authors:   Kwong, P.D.,   Wyatt, R.,   Majeed, S.,   Robinson, J.,   Sweet, R.W.,   Sodroski, J.,   Hendrickson, W.A. Deposition:   2000-11-25 Release:   2000-12-27 Last Modified (REVDAT):   2009-02-24       Experimental Details Hide Method:   X-RAY DIFFRACTION Experimental Data:   N/A Resolution[Å]: 2.90 R-Value: 0.207 (work) R-Free: 0.295 Space Group: C 2 Unit Cell:   Length [Å] Angles [°] a = 174.98 α = 90.00  b = 81.71 β = 90.37  c = 74.48 γ = 90.00        Structure Links Hide Molecule of the Month Features: T-Cell Receptor