HYPERMODIFIED NUCLEOSIDES IN THE ANTICODON OF TRNALYS STABILIZE A CANONICAL U-TURN STRUCTURE DOI:10.2210/pdb1fl8/pdb   NDB ID: 1FL8

1FL8   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) NMR Restraints (Text) NMR Restraints (gz) V2 NMR Restraints (gz)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: RNA Structure Weight: 5554.47 Molecule: ANTICODON DOMAIN OF TRNA(LYS) Polymer: 1 Type: rna Length: 17 Chains: A Fragment: 17-MER TRNA(LYS) ANTICODON DOMAIN Mutation: G27U, U28C, U29A, A41U, A42G, U43A Details: RESIDUES 30-40 (TRNA NUMBERING) ARE IDENTICAL TO THOSE FOUND IN THE ANTICODON DOMAIN OF E. COLI TRNA(LYS) INCLUDING MODIFIED NUCLEOSIDES     Source Hide Polymer: 1 Scientific Name: Synthetic construct   Taxonomy         Related PDB Entries Hide Identifier Details 1BZ2  the same anticodon loop sequence but without modified nucleosides at position 34, 37 or 39  1BZU  the same anticodon loop sequence but without modified nucleosides at position 34 and 37. Pseudouridine is present at postion 39      Modified Residues Hide Identifier Formula Parent Type U8U Search  C11 H18 N3 O8 P S U rnaLinking T6A Search  C15 H21 N6 O11 P A rnaLinking PSU Search  C9 H13 N2 O9 P U rnaLinking     Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: 1FL8     Data in orange boxes are gathered from external resources (when available). Reset Layout

Structure Image     View in 3D More Images... Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Sundaram, M.,  Durant, P.C.,  Davis, D.R. Deposition:   2000-08-11 Release:   2000-10-16 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   SOLUTION NMR Exp. Data:   NMR Restraints NMR Restraint Grid   NMR Ensemble Conformers Calculated:     35 Conformers Submitted:     20 Selection Criteria: structures with the lowest energy NMR Refine Method: SOLUTION NMR