E. COLI GLUCARATE DEHYDRATASE BOUND TO 4-DEOXYGLUCARATE DOI:10.2210/pdb1ecq/pdb

1ECQ   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Lyase Structure Weight: 197895.31 Molecule: GLUCARATE DEHYDRATASE Polymer: 1 Type: protein Length: 446 Chains: A, B, C, D EC#: 4.2.1.40    Organism Escherichia coli Gene Names gudD ygcX b2787 JW2758 UniProtKB:   Protein Feature View | Search PDB | P0AES2         Source Hide Polymer: 1 Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1BQG  E.coli Glucarate dehydratase from Pseudomonas putida  1EC7  E.coli Glucarate dehydratase  1EC8  E.coli Glucarate dehydratase + 5-keto-4-deoxyglucarate  1EC9  E.coli Glucarate Dehydratase + xylarohydroxamate      Ligand Chemical Component Hide Identifier Formula Name Interactions DXG Search  Download  C6 H8 O7 4-DEOXYGLUCARATE   Ligand Explorer IPA Search  Download  C3 H8 O ISOPROPYL ALCOHOL   Ligand Explorer MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) DXG Search  Download  N/A in BindingDB Ki: 1000000 nM - data from BindingMOAD   Ki: 1000000 nM - data from PDBbind       External Domain Annotations Hide SCOP Classification v1.75: 8 Domains - data from SCOP   CATH Classification v3.4.0: 8 Domains - data from CATH   Pfam Classification: 2 Domains - data from Pfam   GO Terms: 8 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Gulick, A.M.,  Hubbard, B.K.,  Gerlt, J.A.,  Rayment, I. Deposition:   2000-01-25 Release:   2000-05-23 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.00 R-Value: 0.209 (obs.) R-Free: 0.305 Space Group: P 1 Unit Cell:   Length [Å] Angles [°] a = 71.11 α = 103.46  b = 84.60 β = 93.97  c = 98.78 γ = 113.03