1D8V

THE RESTRAINED AND MINIMIZED AVERAGE NMR STRUCTURE OF MAP30.


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Submitted: 

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This is version 1.3 of the entry. See complete history


Literature

Solution structure of anti-HIV-1 and anti-tumor protein MAP30: structural insights into its multiple functions.

Wang, Y.X.Neamati, N.Jacob, J.Palmer, I.Stahl, S.J.Kaufman, J.D.Huang, P.L.Huang, P.L.Winslow, H.E.Pommier, Y.Wingfield, P.T.Lee-Huang, S.Bax, A.Torchia, D.A.

(1999) Cell 99: 433-435

  • DOI: https://doi.org/10.1016/s0092-8674(00)81529-9
  • Primary Citation of Related Structures:  
    1D8V

  • PubMed Abstract: 

    We present the solution structure of MAP30, a plant protein with anti-HIV and anti-tumor activities. Structural analysis and subsequent biochemical assays lead to several novel discoveries. First, MAP30 acts like a DNA glycosylase/apurinic (ap) lyase, an additional activity distinct from its known RNA N-glycosidase activity toward the 28S rRNA. Glycosylase/ap lyase activity explains MAP30's apparent inhibition of the HIV-1 integrase, MAP30's ability to irreversibly relax supercoiled DNA, and may be an alternative cytotoxic pathway that contributes to MAP30's anti-HIV/anti-tumor activities. Second, two distinct, but contiguous, subsites are responsible for MAP30's glycosylase/ap lyase activity. Third, Mn2+ and Zn2+ interact with negatively charged surfaces next to the catalytic sites, facilitating DNA substrate binding instead of directly participating in catalysis.


  • Organizational Affiliation

    Molecular Structural Biology Laboratory, National Institute of Dental and Craniofacial Research, National Institutes of Health, Bethesda, Maryland 20892-4310, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
ANTI-HIV AND ANTI-TUMOR PROTEIN MAP30263Momordica charantiaMutation(s): 0 
UniProt
Find proteins for P24817 (Momordica charantia)
Explore P24817 
Go to UniProtKB:  P24817
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP24817
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Submitted: 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1999-11-19
    Type: Initial release
  • Version 1.1: 2008-04-27
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2022-02-16
    Changes: Database references, Derived calculations