The role of phenylalanine 8 in the stabilization of the S protein-S peptide interaction: Packing and cavities DOI:10.2210/pdb1d5e/pdb

1D5E   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase Structure Weight: 13090.78 Molecule: S PEPTIDE Polymer: 1 Type: protein Length: 15 Chains: A Fragment: RESIDUES 1-15 Mutation: F8(NLE) Details: SYNTHETIC Molecule: RNASE S Polymer: 2 Type: protein Length: 101 Chains: B EC#: 3.1.27.5    Fragment: RESIDUES 24-124 Organism Bos taurus Gene Names RNASE1 RNS1 UniProtKB:   Protein Feature View | Search PDB | P61823         Source Hide Polymer: 1 Scientific Name: Synthetic construct   Taxonomy     Polymer: 2 Scientific Name: Bos taurus   Taxonomy   Common Name: Cattle       Related PDB Entries Hide Identifier Details 1D5D  RELATED STUDY  1D5H  RELATED STUDY  1RBH  Control structure, RNase S15 (M13L)      Ligand Chemical Component Hide Identifier Formula Name Interactions SO4 Search  Download  O4 S SULFATE ION   Ligand Explorer     Modified Residues Hide Identifier Formula Parent Type NLE Search  C6 H13 N O2 LEU lPeptideLinking SET Search  C3 H8 N2 O2 SER lPeptideLinking     External Domain Annotations Hide SCOP Classification v1.75: 1 Domain - data from SCOP   CATH Classification v3.4.0: 1 Domain - data from CATH   Pfam Classification: 1 Domain - data from Pfam   GO Terms: 7 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Ratnaparkhi, G.S.,  Varadarajan, R. Deposition:   1999-10-07 Release:   1999-10-20 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.25 R-Value: 0.209 (obs.) R-Free: 0.231 Space Group: P 31 2 1 Unit Cell:   Length [Å] Angles [°] a = 44.60 α = 90.00  b = 44.60 β = 90.00  c = 98.07 γ = 120.00