ZIF268 ZINC FINGER-DNA COMPLEX
DOI:10.2210/pdb1aay/pdb   NDB ID: PDT039
1AAY
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 17759.18
    Molecule: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3')
    Polymer: 1 Type: dna Length: 11
    Chains: B
    Molecule: DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3')
    Polymer: 2 Type: dna Length: 11
    Chains: C
    Molecule: PROTEIN (ZIF268 ZINC FINGER PEPTIDE)
    Polymer: 3 Type: protein Length: 90
    Chains: A
    Organism: Mus musculus
    Gene Names: Egr1 Egr-1 Krox-24
    UniProtKB: Protein Feature View | Search PDB | P08046  
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Mus musculus   Taxonomy   Common Name: House mouse Expression System: Escherichia coli bl21(de3)  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ZN
    Search 
    Download 
    ZN Zn
    ZINC ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:PDT039
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Elrod-Erickson, M.,  Rould, M.A.,  Pabo, C.O.

    Deposition:   1997-01-18
    Release:   1997-04-21
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   1.60
    R-Value: 0.195 (obs.)
    R-Free: 0.242
    Space Group: C 2 2 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 45.40 α = 90.00 
    b = 56.20 β = 90.00 
    c = 130.80 γ = 90.00