Structural View of HIV/AIDS:
A Video Challenge for High School Students
Human Immunodeficiency Virus (HIV) infection, if untreated, can cause the Acquired Immunodeficiency Disorder Syndrome (AIDS). HIV and AIDS have been the focus of intense scientific study for over three decades. Findings from these studies have contributed to our current understanding of the disease and helped design ways to treat it. In particular, atomic level structures of HIV/AIDS-related proteins have played an important role in the discovery of many treatments. With today's combination therapies, HIV/AIDS has become a manageable chronic illness. However, cases of new HIV infection continue to be reported, demanding broader awareness and understanding of HIV/AIDS.
Resources for learning about HIV/AIDS from PDB-101
- Structural Biology of HIV animation and downloadable poster.
- Molecule of the Month articles on
- Paper model of the HIV capsid.
- How do drugs work? poster
Resources for participating in the Video Challenge
- EduForum – an educational forum for educators and students to ask questions, share ideas and learn from each other.
- Tutorial 1: Protein Visualization with UCSF Chimera, Video Editing with Blender, and Sound Editing in Audacity
- Tutorial 2: Finding and visualizing HIV-related protein-drug complexes
- Tutorial 3: Utilizing AutoPack HIV model for the video challenge
- Example Video
- How to Visualize HIV Capsid
- Molecular Flipbook Animation Software
About the PDB Archive
The Protein Data Bank is a repository for experimentally determined structures of biological macromolecules (proteins, nucleic acids and their complexes). There are ~100,000 structures in the archive, visualization and analysis of which continue to shed light on how the molecules function in health and disease. They also play a critical role in designing new drugs and to treat a wide range of diseases including cancer and HIV/AIDS.
About the RCSB PDB and PDB-101
The RCSB Protein Data Bank (rcsb.org) provides a global resource for the advancement of research and education in biology and medicine by curating, integrating, and disseminating biological macromolecular structural information in the context of function, biological processes, evolution, pathways, and disease states. It offers enhanced access to information about the 3D structures of nucleic acids, proteins, and large molecular machines contained in the PDB archive.
The PDB-101 education portal PDB-101 packages together RCSB PDB resources that promote exploration in the world of proteins and nucleic acids for teachers, students, and the general public.
RCSB PDB resources for learning about molecular structures