2MWM

NMR structure of the protein YP_193882.1 from Lactobacillus acidophilus NCFM in presence of FMN


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1APSY 4D-HACANH1.2 mM [U-99% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 50 mM sodium chloride, 5 mM sodium azide95% H2O/5% D2O0.07986.0ambient298
2APSY 5D-HACACONH1.2 mM [U-99% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 50 mM sodium chloride, 5 mM sodium azide95% H2O/5% D2O0.07986.0ambient298
3APSY 5D-CBCACONH1.2 mM [U-99% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 50 mM sodium chloride, 5 mM sodium azide95% H2O/5% D2O0.07986.0ambient298
42D 1H-15N HSQC1.2 mM [U-99% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 50 mM sodium chloride, 5 mM sodium azide95% H2O/5% D2O0.07986.0ambient298
53D 1H-15N NOESY1.2 mM [U-99% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 50 mM sodium chloride, 5 mM sodium azide95% H2O/5% D2O0.07986.0ambient298
63D 1H-13C NOESY aliphatic1.2 mM [U-99% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 50 mM sodium chloride, 5 mM sodium azide95% H2O/5% D2O0.07986.0ambient298
73D 1H-13C NOESY aromatic1.2 mM [U-99% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 50 mM sodium chloride, 5 mM sodium azide95% H2O/5% D2O0.07986.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance600
2BrukerAvance800
NMR Refinement
MethodDetailsSoftware
molecular dynamicsCYANA
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number80
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCYANA3.0Herrmann, Guntert and Wuthrich
2peak pickingCYANA3.0Herrmann, Guntert and Wuthrich
3chemical shift assignmentCYANA3.0Herrmann, Guntert and Wuthrich
4structure solutionCYANA3.0Herrmann, Guntert and Wuthrich
5collectionTOPSPIN3.1Bruker Biospin
6processingTOPSPIN3.1Bruker Biospin
7processingPROSAGuntert
8geometry optimizationOPALLuginbuhl, Guntert, Billeter and Wuthrich
9chemical shift assignmentCARAKeller and Wuthrich