1WLX
Solution structure of the third spectrin repeat of alpha-actinin-4
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 0.6mM actinin-4; 25mM phosphate buffer; 100mM NaCl; 90% H2O, 10% D2O; 0.01% NaN3 | 90% H2O/10% D2O | 100mM NaCl | 6.75 | ambient | 298 | |
2 | 2D NOESY | 0.6mM actinin-4; 25mM phosphate buffer; 100mM NaCl; 90% H2O, 10% D2O; 0.01% NaN3 | 100% D2O | 100mM NaCl | 6.75 | ambient | 298 | |
3 | 3D_15N-separated_NOESY | 0.6mM actinin-4 U-15N; 25mM phosphate buffer; 100mM NaCl; 90% H2O, 10% D2O; 0.01% NaN3 | 90% H2O/10% D2O | 100mM NaCl | 6.75 | ambient | 298 | |
4 | HNHA | 0.6mM actinin-4 U-15N; 25mM phosphate buffer; 100mM NaCl; 90% H2O, 10% D2O; 0.01% NaN3 | 90% H2O/10% D2O | 100mM NaCl | 6.75 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITY | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing, molecular dynamics, torsion angle dynamics | Structures are based on a total of 2256 restraints; 2021 NOE-derived distance constraints, 235 dihedral angle restraints | NMRPipe |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
---|---|
Details | Assignments were obtained using HNCACB, CBCA(CO)NH, HNCO, H(CCO)NH-TOCSY, C(CO)NH-TOCSY, 15N NOESY-HSQC, 13C HSQC, 1H TOCSY, 1H NOESY |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | 1.8 | Delaglio et al |
2 | data analysis | Sparky | 3.11 | Goddard and Kneller |
3 | structure solution | CNS | 1.1 | Brunger et al |
4 | structure solution | ARIA | 1.2 | Linge and Nilges |
5 | refinement | ARIA | 1.2 | Linge and Nilges |