2O0T


The three dimensional structure of diaminopimelate decarboxylase from Mycobacterium tuberculosis reveals a tetrameric enzyme organisation


Domain Annotation: CATH CATH Database (version 4.2.0) Homepage

ChainDomainClassArchitectureTopologyHomology
A2.40.37.10 Mainly Beta Beta Barrel Lyase, Ornithine Decarboxylase Chain A, domain 1
A2.40.37.10 Mainly Beta Beta Barrel Lyase, Ornithine Decarboxylase Chain A, domain 1
A3.20.20.10 Alpha Beta Alpha-Beta Barrel TIM Barrel Alanine racemase
B2.40.37.10 Mainly Beta Beta Barrel Lyase, Ornithine Decarboxylase Chain A, domain 1
B2.40.37.10 Mainly Beta Beta Barrel Lyase, Ornithine Decarboxylase Chain A, domain 1
B3.20.20.10 Alpha Beta Alpha-Beta Barrel TIM Barrel Alanine racemase
C2.40.37.10 Mainly Beta Beta Barrel Lyase, Ornithine Decarboxylase Chain A, domain 1
C2.40.37.10 Mainly Beta Beta Barrel Lyase, Ornithine Decarboxylase Chain A, domain 1
C3.20.20.10 Alpha Beta Alpha-Beta Barrel TIM Barrel Alanine racemase
D2.40.37.10 Mainly Beta Beta Barrel Lyase, Ornithine Decarboxylase Chain A, domain 1
D2.40.37.10 Mainly Beta Beta Barrel Lyase, Ornithine Decarboxylase Chain A, domain 1
D3.20.20.10 Alpha Beta Alpha-Beta Barrel TIM Barrel Alanine racemase

Protein Family Annotation Pfam Database Homepage

ChainsAccessionIdentifierDescriptionCommentsSource
A, B, C, DPF02784Pyridoxal-dependent decarboxylase, pyridoxal binding domain (Orn_Arg_deC_N)Pyridoxal-dependent decarboxylase, pyridoxal binding domainThese pyridoxal-dependent decarboxylases acting on ornithine, lysine, arginine and related substrates This domain has a TIM barrel fold.Domain
A, B, C, DPF00278Pyridoxal-dependent decarboxylase, C-terminal sheet domain (Orn_DAP_Arg_deC)Pyridoxal-dependent decarboxylase, C-terminal sheet domainThese pyridoxal-dependent decarboxylases act on ornithine, lysine, arginine and related substrates.Domain

Gene Product Annotation Gene Product Annotation

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, DDiaminopimelate decarboxylase

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B, C, DLLP Parent Component: LYS

RESID:  AA0119

PSI-MOD :  N6-pyridoxal phosphate-L-lysine MOD:00128