2GIY

Crystal Structure of the C-terminal domain of the HSV-1 gE ectodomain

Domain Annotation: SCOP Classification SCOP Database (version: 2.0) Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species
A	d2giya1	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	V set domains (antibody variable domain-like)	Alphaherpesvirus glycoprotein E	(Human alphaherpesvirus 1 strain KOS ) [TaxId: 10306 ]
A	d2giya2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Human alphaherpesvirus 1 strain KOS ) [TaxId: 10306 ]
B	d2giyb2	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	V set domains (antibody variable domain-like)	Alphaherpesvirus glycoprotein E	(Human alphaherpesvirus 1 strain KOS ) [TaxId: 10306 ]
B	d2giyb3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Human alphaherpesvirus 1 strain KOS ) [TaxId: 10306 ]

Domain Annotation: CATH CATH Database (version 4.2.0) Homepage

Chain	Domain	Class	Architecture	Topology	Homology
A	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins
B	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Identifier	Description	Comments	Source
A, B	PF02480	Alphaherpesvirus glycoprotein E (Herpes_gE)	Alphaherpesvirus glycoprotein E	-	Family

Gene Product Annotation Gene Product Annotation

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Glycoprotein E	binding protein binding identical protein binding	response to external stimulus response to biotic stimulus viral process modulation by virus of host process mitigation of host defenses by virus mitigation of host defenses by symbiont mitigation of host immune response by virus modulation of process of other organism response to external biotic stimulus modulation by symbiont of host process biological process involved in symbiotic interaction biological process involved in interspecies interaction between organisms regulation of defense response to virus by virus response to stimulus biological process involved in interaction with host response to other organism modulation of process of other organism involved in symbiotic interaction response to defenses of other organism response to host defenses response to host	cell junction cellular anatomical entity host cellular component host cell cytoplasm host cell part host intracellular part host cell cytoplasm part host intracellular region host cell host cell Golgi apparatus host cell plasma membrane host cell membrane host cell junction membrane integral component of membrane intrinsic component of membrane virion viral envelope viral membrane virion part virion membrane host intracellular organelle host intracellular membrane-bounded organelle host cell endosome host cell endosome membrane host cell endomembrane system host cell Golgi membrane

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.